This is the reason why to use IR-LEDs. So only the infra-red part of light traversing the filter are captured by the webcam. Also what you find out is, that the floppy disk material isn't that good as that for a ir-filter, because it let through a small portion of visible light, but block to much of any light in general.
See also this topic:
http://forum.free-track.net/index.php?showtopic=3205